STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CELF4CUGBP Elav-like family member 4. (413 aa)    
Predicted Functional Partners:
MEX3B
Mex-3 RNA binding family member B.
      
 0.560
ENSUAMP00000017321
SRRM_C domain-containing protein.
   
  
 0.553
RBFOX3
RNA binding fox-1 homolog 3.
   
  
 0.470
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
      
 0.457
XXYLT1
Xyloside xylosyltransferase 1.
      
 0.457
NOVA2
NOVA alternative splicing regulator 2.
   
  
 0.454
NOVA1
NOVA alternative splicing regulator 1.
   
  
 0.454
DHDDS
Alkyl transferase; Belongs to the UPP synthase family.
      
 0.453
TWF2
Twinfilin actin binding protein 2.
      
 0.451
ENSUAMP00000014570
RRM domain-containing protein.
      
 0.444
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.