STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf49Chromosome 5 open reading frame 49. (179 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.934
C4orf47
Chromosome 4 open reading frame 47.
  
  
 0.806
ARMC3
Armadillo repeat containing 3.
   
  
 0.768
ENKUR
Enkurin, TRPC channel interacting protein.
    
 
 0.763
ENSUAMP00000027945
Uncharacterized protein.
      
 0.746
ENSUAMP00000000737
Uncharacterized protein.
      
 0.674
ENSUAMP00000000744
Uncharacterized protein.
      
 0.674
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.667
SPACA9
Sperm acrosome associated 9.
    
 
 0.666
ENSUAMP00000030726
Uncharacterized protein.
   
   0.638
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.