STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUAMP00000009550Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.953
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.950
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.940
WDR82
WD repeat domain 82.
   
 0.940
WDR33
WD repeat domain 33.
    
 0.937
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.935
ENSUAMP00000006694
SER_THR_PHOSPHATASE domain-containing protein.
   
 0.870
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.868
CPSF4L
Cleavage and polyadenylation specific factor 4 like.
   
 0.861
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.861
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.