STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMDHD1Amidohydrolase domain containing 1. (426 aa)    
Predicted Functional Partners:
UROC1
Urocanate hydratase 1.
  
 
 0.987
FTCD
Formimidoyltransferase cyclodeaminase.
  
 
 0.987
HAL
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
 
 0.928
UPRT
Uracil phosphoribosyltransferase homolog.
  
 
 0.841
ENSUAMP00000028238
PNP_UDP_1 domain-containing protein.
  
 
 0.773
MTAP
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
  
 
 0.769
UPP1
Uridine phosphorylase 1.
    
 0.768
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
   
 
 0.725
ENSUAMP00000013944
Uncharacterized protein.
  
 
 0.677
XDH
Xanthine dehydrogenase.
  
 
 0.677
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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