STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT11tRNA methyltransferase 11 homolog. (412 aa)    
Predicted Functional Partners:
ENSUAMP00000019210
Uncharacterized protein.
   
 0.960
ENSUAMP00000023714
Uncharacterized protein.
   
 0.960
WDR36
WD repeat domain 36.
   
    0.832
DUS1L
Dihydrouridine synthase 1 like.
   
  
 0.823
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.776
RPF2
Ribosome production factor 2 homolog.
   
    0.771
RCL1
RNA terminal phosphate cyclase like 1.
   
    0.760
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
    0.753
ENSUAMP00000024921
Uncharacterized protein.
   
    0.751
WDR75
WD repeat domain 75.
   
    0.749
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.