STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUAMP00000010701Uncharacterized protein. (51 aa)    
Predicted Functional Partners:
BMP4
Bone morphogenetic protein 4.
    
 0.559
BMP2
Bone morphogenetic protein 2.
    
 0.514
DHRS2
Dehydrogenase/reductase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.477
CDH1
Cadherin 1; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.461
ZNF793
Zinc finger protein 793.
  
 
  0.456
MFAP1
Microfibril associated protein 1.
    
 
 0.447
ENSUAMP00000003569
Fibrinogen C-terminal domain-containing protein.
    
 0.444
ENSUAMP00000014378
Fibrinogen C-terminal domain-containing protein.
    
 0.444
ALMS1
ALMS1 centrosome and basal body associated protein.
  
  0.426
OSGEPL1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.
      
 0.408
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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