STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDCCAG8Serologically defined colon cancer antigen 8. (686 aa)    
Predicted Functional Partners:
ENSUAMP00000024278
Uncharacterized protein.
    
 
 0.717
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
    
 
 0.661
ENSUAMP00000005048
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.658
GPRIN3
GPRIN family member 3.
      
 0.635
NEK4
NIMA related kinase 4.
      
 0.626
OFD1
OFD1 centriole and centriolar satellite protein.
    
 
 0.612
AHI1
Abelson helper integration site 1.
   
 0.593
KARS1
Lysine--tRNA ligase.
    
 
 0.558
SPATA7
Spermatogenesis associated 7.
      
 0.551
MYH10
Myosin heavy chain 10; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.545
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.