STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUAMP00000013256Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
ENSUAMP00000013260
Uncharacterized protein.
 
     0.904
STX3
Syntaxin 3; Belongs to the syntaxin family.
    
 0.534
STX4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.526
STARD5
StAR related lipid transfer domain containing 5.
      
 0.526
TXLNA
Taxilin alpha.
  
 
  
0.523
ENSUAMP00000001132
Uncharacterized protein.
      
 0.517
ENSUAMP00000013739
RRM domain-containing protein.
      
 0.457
AKAP17A
A-kinase anchoring protein 17A.
      
 0.457
CHMP1A
Charged multivesicular body protein 1A.
      
 0.453
TRAPPC3
Trafficking protein particle complex 3.
    
 
 0.452
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.