STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUAMP00000015859Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
PNKD
PNKD metallo-beta-lactamase domain containing.
    
 
 0.689
SLC35D3
Solute carrier family 35 member D3.
      
 0.676
PCDH10
Protocadherin 10.
      
 0.523
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.520
CCDC88A
Coiled-coil domain containing 88A.
      
 0.452
KIAA1324
KIAA1324.
      
 0.430
RAB39B
RAB39B, member RAS oncogene family.
      
 0.420
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.