STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUAMP00000017169Uncharacterized protein. (843 aa)    
Predicted Functional Partners:
UBXN11
UBX domain protein 11.
      
 0.759
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.755
CCDC8
Coiled-coil domain containing 8.
   
 0.727
WDR18
WD repeat domain 18.
   
 0.660
TRIM72
Tripartite motif containing 72.
   
 
 0.651
MYH7B
Myosin heavy chain 7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.650
ENSUAMP00000027877
PA14 domain-containing protein.
     
 0.648
PPP1R27
Protein phosphatase 1 regulatory subunit 27.
   
 0.641
CCDC60
Coiled-coil domain containing 60.
      
 0.629
ENSUAMP00000020065
Uncharacterized protein.
    
 0.605
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.