STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIF1BYip1 interacting factor homolog B, membrane trafficking protein. (309 aa)    
Predicted Functional Partners:
YIPF4
Protein YIPF.
   
 
 0.874
YIPF5
Protein YIPF.
   
 
 0.867
YIPF2
Protein YIPF.
   
  
 0.763
YIPF1
Protein YIPF.
   
  
 0.760
REEP2
Receptor expression-enhancing protein.
      
 0.745
YIPF6
Protein YIPF.
      
 0.725
RABAC1
PRA1 family protein.
   
 
 0.694
REEP1
Receptor expression-enhancing protein.
      
 0.679
SELENOS
Selenoprotein S.
   
 
 0.663
YIPF7
Protein YIPF.
   
 
 0.663
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.