STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FANK1Fibronectin type III and ankyrin repeat domains 1. (338 aa)    
Predicted Functional Partners:
LRRC23
Leucine rich repeat containing 23.
   
 0.609
CCDC113
Coiled-coil domain containing 113.
   
  
 0.587
ENSUAMP00000025015
SCAN box domain-containing protein.
    
 0.563
ENSUAMP00000025019
SCAN box domain-containing protein.
    
 0.563
ENSUAMP00000034163
Fibronectin type-III domain-containing protein.
      
 0.558
FNDC7
Fibronectin type III domain containing 7.
      
 0.552
PDGFRL
Platelet derived growth factor receptor like.
     
 0.542
ENSUAMP00000024402
AB hydrolase-1 domain-containing protein.
   
 0.525
ENSUAMP00000011236
Protein kinase domain-containing protein.
    
 0.518
ENSUAMP00000033172
Ig-like domain-containing protein.
    
 0.518
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.