STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF407Zinc finger protein 407. (2249 aa)    
Predicted Functional Partners:
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.802
SUSD4
Sushi domain containing 4.
      
 0.758
SEL1L3
SEL1L family member 3.
      
 0.749
BCAS3
BCAS3 microtubule associated cell migration factor.
      
 0.742
GNA12
G protein subunit alpha 12.
    
 0.739
RIBC1
RIB43A domain with coiled-coils 1.
    
 0.680
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
    
 0.619
ZNF236
Zinc finger protein 236.
   
  
0.601
KCNH7
Potassium voltage-gated channel subfamily H member 7.
   
  
 0.565
ENSUAMP00000011103
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.552
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.