STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB1Calcium and integrin binding 1. (191 aa)    
Predicted Functional Partners:
TMC2
Transmembrane channel-like protein.
    
 0.899
TMC1
Transmembrane channel-like protein.
    
 0.790
ZNF184
Zinc finger protein 184.
    
 0.745
ENSUAMP00000017955
Uncharacterized protein.
      
 0.727
LDLRAD4
Low density lipoprotein receptor class A domain containing 4.
   
  
 0.720
TMC3
Transmembrane channel-like protein.
    
 0.692
ENSUAMP00000006968
Protein kinase domain-containing protein.
    
 0.674
ENSUAMP00000006973
Protein kinase domain-containing protein.
    
 0.674
CAMTA2
Calmodulin binding transcription activator 2.
      
 0.634
ALG3
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
    
 
 0.633
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.