Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPEB4 | ENSUAMP00000012092 | ENSUAMP00000018095 | ENSUAMP00000012092 | Cytoplasmic polyadenylation element binding protein 4. | Uncharacterized protein. | 0.926 |
CPEB4 | PAPOLG | ENSUAMP00000018095 | ENSUAMP00000013818 | Cytoplasmic polyadenylation element binding protein 4. | Poly(A) polymerase gamma. | 0.403 |
CPEB4 | TENT2 | ENSUAMP00000018095 | ENSUAMP00000026383 | Cytoplasmic polyadenylation element binding protein 4. | Terminal nucleotidyltransferase 2. | 0.585 |
ENSUAMP00000011245 | PAPOLG | ENSUAMP00000011245 | ENSUAMP00000013818 | Uncharacterized protein. | Poly(A) polymerase gamma. | 0.877 |
ENSUAMP00000011245 | TENT2 | ENSUAMP00000011245 | ENSUAMP00000026383 | Uncharacterized protein. | Terminal nucleotidyltransferase 2. | 0.579 |
ENSUAMP00000011245 | XRN2 | ENSUAMP00000011245 | ENSUAMP00000032544 | Uncharacterized protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.455 |
ENSUAMP00000012092 | CPEB4 | ENSUAMP00000012092 | ENSUAMP00000018095 | Uncharacterized protein. | Cytoplasmic polyadenylation element binding protein 4. | 0.926 |
ENSUAMP00000012092 | PAPOLG | ENSUAMP00000012092 | ENSUAMP00000013818 | Uncharacterized protein. | Poly(A) polymerase gamma. | 0.457 |
ENSUAMP00000012092 | TENT2 | ENSUAMP00000012092 | ENSUAMP00000026383 | Uncharacterized protein. | Terminal nucleotidyltransferase 2. | 0.708 |
GNL2 | GRSF1 | ENSUAMP00000017795 | ENSUAMP00000010871 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | G-rich RNA sequence binding factor 1. | 0.477 |
GNL2 | PAPOLG | ENSUAMP00000017795 | ENSUAMP00000013818 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Poly(A) polymerase gamma. | 0.406 |
GNL2 | RSL1D1 | ENSUAMP00000017795 | ENSUAMP00000005242 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosomal L1 domain containing 1. | 0.992 |
GNL2 | SART1 | ENSUAMP00000017795 | ENSUAMP00000026863 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. | 0.543 |
GNL2 | SURF6 | ENSUAMP00000017795 | ENSUAMP00000018443 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Surfeit 6. | 0.904 |
GNL2 | TENT2 | ENSUAMP00000017795 | ENSUAMP00000026383 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Terminal nucleotidyltransferase 2. | 0.630 |
GNL2 | XRN2 | ENSUAMP00000017795 | ENSUAMP00000032544 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.509 |
GRSF1 | GNL2 | ENSUAMP00000010871 | ENSUAMP00000017795 | G-rich RNA sequence binding factor 1. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.477 |
GRSF1 | RSL1D1 | ENSUAMP00000010871 | ENSUAMP00000005242 | G-rich RNA sequence binding factor 1. | Ribosomal L1 domain containing 1. | 0.566 |
GRSF1 | SART1 | ENSUAMP00000010871 | ENSUAMP00000026863 | G-rich RNA sequence binding factor 1. | Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. | 0.460 |
GRSF1 | SURF6 | ENSUAMP00000010871 | ENSUAMP00000018443 | G-rich RNA sequence binding factor 1. | Surfeit 6. | 0.635 |
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