STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF13Ring finger protein 13. (230 aa)    
Predicted Functional Partners:
ENSUAMP00000001264
RING-type domain-containing protein.
 
     0.921
ENSUAMP00000025192
Ubiquitin-like domain-containing protein.
    
  0.544
CGRRF1
Cell growth regulator with ring finger domain 1.
    
 
 0.543
TTC26
Tetratricopeptide repeat domain 26.
      
 0.532
RNF170
Ring finger protein 170.
      
 0.525
RNF185
Ring finger protein 185.
      
 0.523
ENSUAMP00000036578
Uncharacterized protein.
      
 0.493
TMEM183A
Transmembrane protein 183A.
      
 0.461
RNF151
Ring finger protein 151.
     
 0.459
GPR65
G protein-coupled receptor 65; Belongs to the G-protein coupled receptor 1 family.
      
 0.454
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.