STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUAMP00000027807Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
VPS54
VPS54 subunit of GARP complex.
   
 0.995
VPS52
VPS52 subunit of GARP complex.
   
 0.995
VPS51
VPS51 subunit of GARP complex.
    
 0.994
ENSUAMP00000011716
Vps53_N domain-containing protein.
 
   
  0.933
VPS50
VPS50 subunit of EARP/GARPII complex.
    
 
 0.933
EIPR1
EARP complex and GARP complex interacting protein 1.
    
 0.886
COG1
Component of oligomeric golgi complex 1.
     
 0.857
COG4
Component of oligomeric golgi complex 4.
   
 
 0.850
ENSUAMP00000029446
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 
 0.847
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.832
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.