STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM163AFamily with sequence similarity 163 member A. (166 aa)    
Predicted Functional Partners:
MAMDC2
MAM domain containing 2.
      
 0.752
CCBE1
Collagen and calcium binding EGF domains 1.
      
 0.635
STK32A
Serine/threonine kinase 32A; Belongs to the protein kinase superfamily.
      
 0.633
TAFA1
TAFA chemokine like family member 1.
      
 0.574
PCSK2
Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family.
      
 0.557
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
      
 0.514
RETREG3
Reticulophagy regulator family member 3.
      
 0.510
CACFD1
Calcium channel flower domain containing 1.
      
 0.510
MINDY2
MINDY lysine 48 deubiquitinase 2.
      
 0.448
TOR1AIP2
Torsin 1A interacting protein 2.
      
 0.439
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.