STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFL1UFM1 specific ligase 1. (516 aa)    
Predicted Functional Partners:
DDRGK1
DDRGK domain containing 1.
    
 
 0.957
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
   
 
 0.951
UBA5
Ubiquitin like modifier activating enzyme 5.
   
 
 0.870
UFM1
Ubiquitin fold modifier 1.
   
 
 0.806
UFSP2
UFM1 specific peptidase 2.
   
  
 0.761
UFSP1
UFM1 specific peptidase 1 (inactive).
   
  
 0.750
PAWR
Pro-apoptotic WT1 regulator.
      
 0.742
SRD5A3
Steroid 5 alpha-reductase 3.
      
 0.733
ENSUAMP00000025327
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
    
 
 0.726
ENSUAMP00000033467
annotation not available
    
 
 0.726
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.