STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIGD6Tigger transposable element derived 6. (523 aa)    
Predicted Functional Partners:
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.630
PDE6A
Phosphodiesterase.
      
 0.540
PDE6C
Phosphodiesterase.
      
 0.526
ENSUAMP00000016664
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.471
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.471
SLC26A2
Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.470
PDE10A
Phosphodiesterase.
      
 0.459
ENSUAMP00000015973
THAP-type domain-containing protein.
      
 0.430
THAP9
THAP domain containing 9.
      
 0.430
PDE6B
Phosphodiesterase.
      
 0.429
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.