STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST13Carbohydrate sulfotransferase. (318 aa)    
Predicted Functional Partners:
CHST12
Carbohydrate sulfotransferase.
     
0.911
CHST7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.808
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
      
 0.740
DEFB124
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.740
ENSUAMP00000006864
Ig-like domain-containing protein.
     
 0.634
CSGALNACT2
Hexosyltransferase.
     
 0.599
HAPLN2
Hyaluronan and proteoglycan link protein 2.
   
  
 0.563
ENSUAMP00000011199
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.531
GALNT13
Polypeptide N-acetylgalactosaminyltransferase.
    
 
 0.525
ENSUAMP00000031905
Uncharacterized protein.
    
 
 0.525
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.