Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX10 | EIF4A3 | ENSUAMP00000017867 | ENSUAMP00000036219 | RNA helicase. | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | 0.703 |
DDX10 | KRR1 | ENSUAMP00000017867 | ENSUAMP00000020653 | RNA helicase. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.872 |
DDX10 | NAT10 | ENSUAMP00000017867 | ENSUAMP00000013871 | RNA helicase. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.861 |
DDX10 | NGDN | ENSUAMP00000017867 | ENSUAMP00000008918 | RNA helicase. | Neuroguidin. | 0.833 |
DDX10 | NOC4L | ENSUAMP00000017867 | ENSUAMP00000002503 | RNA helicase. | Nucleolar complex associated 4 homolog. | 0.489 |
DDX10 | NOM1 | ENSUAMP00000017867 | ENSUAMP00000033393 | RNA helicase. | Nucleolar protein with MIF4G domain 1. | 0.980 |
DDX10 | RRP36 | ENSUAMP00000017867 | ENSUAMP00000020077 | RNA helicase. | Ribosomal RNA processing 36. | 0.969 |
DDX10 | RRP9 | ENSUAMP00000017867 | ENSUAMP00000027028 | RNA helicase. | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.675 |
DDX10 | UTP3 | ENSUAMP00000017867 | ENSUAMP00000010888 | RNA helicase. | UTP3 small subunit processome component. | 0.977 |
DDX10 | WDR3 | ENSUAMP00000017867 | ENSUAMP00000030343 | RNA helicase. | WD repeat domain 3. | 0.808 |
EIF4A3 | DDX10 | ENSUAMP00000036219 | ENSUAMP00000017867 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | RNA helicase. | 0.703 |
EIF4A3 | KRR1 | ENSUAMP00000036219 | ENSUAMP00000020653 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.707 |
EIF4A3 | NAT10 | ENSUAMP00000036219 | ENSUAMP00000013871 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.536 |
EIF4A3 | NGDN | ENSUAMP00000036219 | ENSUAMP00000008918 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Neuroguidin. | 0.971 |
EIF4A3 | NOC4L | ENSUAMP00000036219 | ENSUAMP00000002503 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Nucleolar complex associated 4 homolog. | 0.501 |
EIF4A3 | NOM1 | ENSUAMP00000036219 | ENSUAMP00000033393 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Nucleolar protein with MIF4G domain 1. | 0.964 |
EIF4A3 | RRP36 | ENSUAMP00000036219 | ENSUAMP00000020077 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Ribosomal RNA processing 36. | 0.623 |
EIF4A3 | UTP3 | ENSUAMP00000036219 | ENSUAMP00000010888 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | UTP3 small subunit processome component. | 0.640 |
EIF4A3 | WDR3 | ENSUAMP00000036219 | ENSUAMP00000030343 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | WD repeat domain 3. | 0.503 |
KRR1 | DDX10 | ENSUAMP00000020653 | ENSUAMP00000017867 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | RNA helicase. | 0.872 |
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