STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JADE3Jade family PHD finger 3. (825 aa)    
Predicted Functional Partners:
KAT7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.926
MEAF6
MYST/Esa1 associated factor 6.
    
 0.878
ING5
Inhibitor of growth protein.
    
 0.715
ING4
Inhibitor of growth protein.
    
 0.700
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.673
TRIM66
Tripartite motif containing 66.
      
 0.589
KAT8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.540
KAT5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.540
GRIK5
Glutamate ionotropic receptor kainate type subunit 5.
      
 0.536
RFX1
Regulatory factor X1.
      
 0.505
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.