STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUAMP00000035945Ubiquitin-like domain-containing protein. (90 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.914
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.894
ENSUAMP00000022960
Uncharacterized protein.
   
 0.894
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
 0.894
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.885
ENSUAMP00000017262
Uncharacterized protein.
   
 0.872
TRAF7
TNF receptor associated factor 7.
   
 0.845
ENSUAMP00000020329
Uncharacterized protein.
   
 0.845
UBXN7
UBX domain protein 7.
    
 0.803
ENSUAMP00000014259
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.799
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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