STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC167Coiled-coil domain containing 167. (97 aa)    
Predicted Functional Partners:
ARFGEF3
ARFGEF family member 3.
      
 0.746
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
      
 0.744
CHMP7
Charged multivesicular body protein 7.
      
 0.723
PKIA
cAMP-dependent protein kinase inhibitor; Belongs to the PKI family.
      
 0.628
SAC3D1
SAC3 domain containing 1.
      
 0.576
ENSUAMP00000020992
ATP-cone domain-containing protein.
      
 0.542
FN3KRP
Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family.
      
 0.531
CCDC106
Coiled-coil domain containing 106.
      
 0.521
ENSUAMP00000015198
Uncharacterized protein.
      
 0.520
DEPDC1B
DEP domain containing 1B.
      
 0.519
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.