STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAFAH2Platelet activating factor acetylhydrolase 2. (389 aa)    
Predicted Functional Partners:
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
     
 0.947
APOB
Apolipoprotein B.
     
 0.937
ENSSMRP00000007741
annotation not available
     
 0.932
LCAT
Lecithin-cholesterol acyltransferase.
     
 0.930
ENSSMRP00000010939
annotation not available
     
 0.930
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
     
 0.929
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
     
 0.923
LIPC
Lipase C, hepatic type.
     
 0.920
PLTP
Phospholipid transfer protein.
     
 0.919
CETP
Cholesteryl ester transfer protein.
     
 0.917
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.