STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMRP00000001794annotation not available (204 aa)    
Predicted Functional Partners:
DDX1
DEAD-box helicase 1.
    
 0.956
RTRAF
RNA transcription, translation and transport factor.
    
 0.955
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.955
C2orf49
Chromosome 2 open reading frame 49.
    
 0.946
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.877
ENSSMRP00000018903
annotation not available
 
      0.868
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.865
ZBTB8OS
Zinc finger and BTB domain containing 8 opposite strand.
    
 0.864
FAM98A
Family with sequence similarity 98 member A.
  
 
 
0.843
FAM98C
Family with sequence similarity 98 member C.
  
  
 
0.756
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.