Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BNC1 | UPK3B | ENSSMRP00000007805 | ENSSMRP00000003914 | Basonuclin 1. | Uroplakin 3B. | 0.454 |
ENSSMRP00000029530 | UPK3B | ENSSMRP00000029530 | ENSSMRP00000003914 | annotation not available | Uroplakin 3B. | 0.587 |
RBP5 | UPK1A | ENSSMRP00000024968 | ENSSMRP00000005961 | Retinol binding protein 5. | Uroplakin 1A. | 0.439 |
RBP5 | UPK3B | ENSSMRP00000024968 | ENSSMRP00000003914 | Retinol binding protein 5. | Uroplakin 3B. | 0.463 |
UPK1A | RBP5 | ENSSMRP00000005961 | ENSSMRP00000024968 | Uroplakin 1A. | Retinol binding protein 5. | 0.439 |
UPK1A | UPK1B | ENSSMRP00000005961 | ENSSMRP00000007802 | Uroplakin 1A. | Uroplakin 1B. | 0.556 |
UPK1A | UPK3B | ENSSMRP00000005961 | ENSSMRP00000003914 | Uroplakin 1A. | Uroplakin 3B. | 0.608 |
UPK1B | UPK1A | ENSSMRP00000007802 | ENSSMRP00000005961 | Uroplakin 1B. | Uroplakin 1A. | 0.556 |
UPK1B | UPK3B | ENSSMRP00000007802 | ENSSMRP00000003914 | Uroplakin 1B. | Uroplakin 3B. | 0.749 |
UPK3B | BNC1 | ENSSMRP00000003914 | ENSSMRP00000007805 | Uroplakin 3B. | Basonuclin 1. | 0.454 |
UPK3B | ENSSMRP00000029530 | ENSSMRP00000003914 | ENSSMRP00000029530 | Uroplakin 3B. | annotation not available | 0.587 |
UPK3B | RBP5 | ENSSMRP00000003914 | ENSSMRP00000024968 | Uroplakin 3B. | Retinol binding protein 5. | 0.463 |
UPK3B | UPK1A | ENSSMRP00000003914 | ENSSMRP00000005961 | Uroplakin 3B. | Uroplakin 1A. | 0.608 |
UPK3B | UPK1B | ENSSMRP00000003914 | ENSSMRP00000007802 | Uroplakin 3B. | Uroplakin 1B. | 0.749 |