STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM1ALysine demethylase 1A. (869 aa)    
Predicted Functional Partners:
RCOR1
REST corepressor 1.
    
 0.999
PHF21A
PHD finger protein 21A.
    
 0.995
RCOR2
REST corepressor 2.
    
 0.985
RCOR3
REST corepressor 3.
    
 0.985
HMG20B
High mobility group 20B.
   
 0.984
HMG20A
High mobility group 20A.
   
 0.951
ENSSMRP00000002402
annotation not available
   
 0.940
HDAC1
Histone deacetylase 1.
   
 0.940
HDAC2
Histone deacetylase 2.
   
 0.940
GLYR1
Glyoxylate reductase 1 homolog.
    
 
 0.940
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.