STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB27ARAB27A, member RAS oncogene family. (397 aa)    
Predicted Functional Partners:
MLPH
Melanophilin.
    
 
 0.912
SYTL2
Synaptotagmin like 2.
    
 
 0.780
ENSSMRP00000020592
annotation not available
    
 
 0.780
SYTL4
Synaptotagmin like 4.
   
 
 0.777
ENSSMRP00000010694
annotation not available
    
 0.770
MADD
MAP kinase activating death domain.
     
 0.757
ENSSMRP00000007179
annotation not available
    
 0.741
SYTL1
Synaptotagmin like 1.
    
 
 0.739
SYTL5
Synaptotagmin like 5.
   
 
 0.724
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
     
 0.685
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.