STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT2D2SFT2 domain containing 2. (160 aa)    
Predicted Functional Partners:
YKT6
YKT6 v-SNARE homolog.
    
 
 0.727
ENSSMRP00000014252
annotation not available
    
 
 0.629
STX5
Syntaxin 5.
    
 
 0.607
GOLT1A
Golgi transport 1A.
   
 
 0.566
ENSSMRP00000003699
annotation not available
   
 
 0.549
GOLT1B
Golgi transport 1B.
   
 
 0.549
ENSSMRP00000002075
annotation not available
      
 0.433
CTDNEP1
CTD nuclear envelope phosphatase 1.
      
 0.424
COG6
Component of oligomeric golgi complex 6.
    
   0.424
GOSR1
Golgi SNAP receptor complex member 1.
   
 
 0.409
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.