STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD7BOTU deubiquitinase 7B. (873 aa)    
Predicted Functional Partners:
ENSSMRP00000027493
annotation not available
   
  0.896
UBXN7
UBX domain protein 7.
   
   0.893
ENSSMRP00000018987
annotation not available
    
  0.881
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.771
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.762
ENSSMRP00000017472
annotation not available
    
  0.762
ENSSMRP00000004493
annotation not available
    
  0.745
TRAF6
TNF receptor associated factor 6.
    
 0.743
TNIP3
TNFAIP3 interacting protein 3.
    
 0.700
TNIP1
TNFAIP3 interacting protein 1.
    
 0.700
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.