STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH7Atonal bHLH transcription factor 7. (148 aa)    
Predicted Functional Partners:
TCF12
Transcription factor 12.
    
 
 0.637
TCF3
Transcription factor 3.
    
 
 0.637
TCF4
Transcription factor 4.
    
 
 0.637
HES1
Hes family bHLH transcription factor 1.
    
 
 0.635
VSX1
Visual system homeobox 1.
   
  
 0.602
VSX2
Visual system homeobox 2.
   
  
 0.591
FOXN4
Forkhead box N4.
   
  
 0.487
GAP43
Growth associated protein 43.
      
 0.435
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.