Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID4A | ARID4B | ENSSMRP00000013061 | ENSSMRP00000028595 | AT-rich interaction domain 4A. | AT-rich interaction domain 4B. | 0.753 |
ARID4A | ENSSMRP00000011724 | ENSSMRP00000013061 | ENSSMRP00000011724 | AT-rich interaction domain 4A. | annotation not available | 0.721 |
ARID4A | MYSM1 | ENSSMRP00000013061 | ENSSMRP00000023200 | AT-rich interaction domain 4A. | Myb like, SWIRM and MPN domains 1. | 0.957 |
ARID4B | ARID4A | ENSSMRP00000028595 | ENSSMRP00000013061 | AT-rich interaction domain 4B. | AT-rich interaction domain 4A. | 0.753 |
ARID4B | ENSSMRP00000011724 | ENSSMRP00000028595 | ENSSMRP00000011724 | AT-rich interaction domain 4B. | annotation not available | 0.721 |
ARID4B | MYSM1 | ENSSMRP00000028595 | ENSSMRP00000023200 | AT-rich interaction domain 4B. | Myb like, SWIRM and MPN domains 1. | 0.959 |
ENSSMRP00000011724 | ARID4A | ENSSMRP00000011724 | ENSSMRP00000013061 | annotation not available | AT-rich interaction domain 4A. | 0.721 |
ENSSMRP00000011724 | ARID4B | ENSSMRP00000011724 | ENSSMRP00000028595 | annotation not available | AT-rich interaction domain 4B. | 0.721 |
ENSSMRP00000011724 | FREM1 | ENSSMRP00000011724 | ENSSMRP00000008654 | annotation not available | FRAS1 related extracellular matrix 1. | 0.544 |
ENSSMRP00000011724 | LEO1 | ENSSMRP00000011724 | ENSSMRP00000029024 | annotation not available | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.808 |
ENSSMRP00000011724 | MET | ENSSMRP00000011724 | ENSSMRP00000016166 | annotation not available | MET proto-oncogene, receptor tyrosine kinase. | 0.591 |
ENSSMRP00000011724 | MST1R | ENSSMRP00000011724 | ENSSMRP00000009907 | annotation not available | Macrophage stimulating 1 receptor. | 0.591 |
ENSSMRP00000011724 | MYSM1 | ENSSMRP00000011724 | ENSSMRP00000023200 | annotation not available | Myb like, SWIRM and MPN domains 1. | 0.737 |
ENSSMRP00000011724 | PTK7 | ENSSMRP00000011724 | ENSSMRP00000022040 | annotation not available | Protein tyrosine kinase 7 (inactive). | 0.570 |
ENSSMRP00000011724 | TTC16 | ENSSMRP00000011724 | ENSSMRP00000014297 | annotation not available | Tetratricopeptide repeat domain 16. | 0.639 |
ENSSMRP00000011724 | YME1L1 | ENSSMRP00000011724 | ENSSMRP00000018287 | annotation not available | YME1 like 1 ATPase. | 0.566 |
FREM1 | ENSSMRP00000011724 | ENSSMRP00000008654 | ENSSMRP00000011724 | FRAS1 related extracellular matrix 1. | annotation not available | 0.544 |
LEO1 | ENSSMRP00000011724 | ENSSMRP00000029024 | ENSSMRP00000011724 | LEO1 homolog, Paf1/RNA polymerase II complex component. | annotation not available | 0.808 |
LEO1 | TTC16 | ENSSMRP00000029024 | ENSSMRP00000014297 | LEO1 homolog, Paf1/RNA polymerase II complex component. | Tetratricopeptide repeat domain 16. | 0.982 |
LEO1 | YME1L1 | ENSSMRP00000029024 | ENSSMRP00000018287 | LEO1 homolog, Paf1/RNA polymerase II complex component. | YME1 like 1 ATPase. | 0.509 |
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