STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMRP00000015556annotation not available (69 aa)    
Predicted Functional Partners:
ENSSMRP00000003634
annotation not available
   
 0.996
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.996
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.996
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.995
ENSSMRP00000019932
annotation not available
   
 0.990
ENSSMRP00000020709
annotation not available
   
 0.990
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.987
PHF5A
PHD finger protein 5A.
   
 0.987
LSM8
LSM8 homolog, U6 small nuclear RNA associated.
   
 0.986
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
0.983
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.