STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM13PR/SET domain 13. (676 aa)    
Predicted Functional Partners:
GART
annotation not available
   
 
  0.551
PTF1A
Pancreas associated transcription factor 1a.
   
 
 0.519
KDM6B
Lysine demethylase 6B.
   
 0.500
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.497
AK9
Adenylate kinase 9.
    
  0.481
POLE
DNA polymerase epsilon, catalytic subunit.
     
 0.477
ENSSMRP00000029777
annotation not available
   
 0.471
RCVRN
Recoverin.
    
 0.463
CCNC
Cyclin C.
    
 0.460
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.454
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.