Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFG3L2 | ENSSMRP00000000622 | ENSSMRP00000004074 | ENSSMRP00000000622 | AFG3 like matrix AAA peptidase subunit 2. | annotation not available | 0.947 |
AFG3L2 | MAIP1 | ENSSMRP00000004074 | ENSSMRP00000026206 | AFG3 like matrix AAA peptidase subunit 2. | Matrix AAA peptidase interacting protein 1. | 0.722 |
AFG3L2 | MCU | ENSSMRP00000004074 | ENSSMRP00000016454 | AFG3 like matrix AAA peptidase subunit 2. | Mitochondrial calcium uniporter. | 0.698 |
AFG3L2 | MCUB | ENSSMRP00000004074 | ENSSMRP00000018831 | AFG3 like matrix AAA peptidase subunit 2. | Mitochondrial calcium uniporter dominant negative beta subunit. | 0.698 |
AFG3L2 | MICU1 | ENSSMRP00000004074 | ENSSMRP00000016447 | AFG3 like matrix AAA peptidase subunit 2. | Mitochondrial calcium uptake 1. | 0.778 |
AFG3L2 | MICU2 | ENSSMRP00000004074 | ENSSMRP00000018990 | AFG3 like matrix AAA peptidase subunit 2. | Mitochondrial calcium uptake 2. | 0.701 |
AFG3L2 | MICU3 | ENSSMRP00000004074 | ENSSMRP00000012180 | AFG3 like matrix AAA peptidase subunit 2. | Mitochondrial calcium uptake family member 3. | 0.649 |
AFG3L2 | SMDT1 | ENSSMRP00000004074 | ENSSMRP00000018949 | AFG3 like matrix AAA peptidase subunit 2. | Single-pass membrane protein with aspartate rich tail 1. | 0.837 |
AFG3L2 | SPG7 | ENSSMRP00000004074 | ENSSMRP00000008822 | AFG3 like matrix AAA peptidase subunit 2. | SPG7 matrix AAA peptidase subunit, paraplegin. | 0.962 |
EDF1 | SMDT1 | ENSSMRP00000014928 | ENSSMRP00000018949 | Endothelial differentiation related factor 1. | Single-pass membrane protein with aspartate rich tail 1. | 0.844 |
ENSSMRP00000000622 | AFG3L2 | ENSSMRP00000000622 | ENSSMRP00000004074 | annotation not available | AFG3 like matrix AAA peptidase subunit 2. | 0.947 |
ENSSMRP00000000622 | MICU1 | ENSSMRP00000000622 | ENSSMRP00000016447 | annotation not available | Mitochondrial calcium uptake 1. | 0.444 |
ENSSMRP00000000622 | SMDT1 | ENSSMRP00000000622 | ENSSMRP00000018949 | annotation not available | Single-pass membrane protein with aspartate rich tail 1. | 0.768 |
ENSSMRP00000000622 | SPG7 | ENSSMRP00000000622 | ENSSMRP00000008822 | annotation not available | SPG7 matrix AAA peptidase subunit, paraplegin. | 0.876 |
MAIP1 | AFG3L2 | ENSSMRP00000026206 | ENSSMRP00000004074 | Matrix AAA peptidase interacting protein 1. | AFG3 like matrix AAA peptidase subunit 2. | 0.722 |
MAIP1 | SMDT1 | ENSSMRP00000026206 | ENSSMRP00000018949 | Matrix AAA peptidase interacting protein 1. | Single-pass membrane protein with aspartate rich tail 1. | 0.774 |
MAIP1 | SPG7 | ENSSMRP00000026206 | ENSSMRP00000008822 | Matrix AAA peptidase interacting protein 1. | SPG7 matrix AAA peptidase subunit, paraplegin. | 0.862 |
MCU | AFG3L2 | ENSSMRP00000016454 | ENSSMRP00000004074 | Mitochondrial calcium uniporter. | AFG3 like matrix AAA peptidase subunit 2. | 0.698 |
MCU | MICU1 | ENSSMRP00000016454 | ENSSMRP00000016447 | Mitochondrial calcium uniporter. | Mitochondrial calcium uptake 1. | 0.988 |
MCU | MICU2 | ENSSMRP00000016454 | ENSSMRP00000018990 | Mitochondrial calcium uniporter. | Mitochondrial calcium uptake 2. | 0.975 |
page 1 of 4