STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN2BUBX domain protein 2B. (316 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.986
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.985
FAF1
Fas associated factor 1.
    
 0.982
UBXN6
UBX domain protein 6.
    
 0.979
UBXN7
UBX domain protein 7.
    
 
 0.963
UBXN2A
UBX domain protein 2A.
  
 
 
0.963
ENSSMRP00000006140
annotation not available
   
 0.963
VCPIP1
Valosin containing protein interacting protein 1.
    
 
 0.954
PLAA
Phospholipase A2 activating protein.
    
 
 0.954
YOD1
YOD1 deubiquitinase.
   
 
 0.947
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.