STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFXN1Sideroflexin 1. (322 aa)    
Predicted Functional Partners:
ENSSMRP00000022563
annotation not available
    
 0.657
ENSSMRP00000025226
annotation not available
    
 0.657
RAB11A
RAB11A, member RAS oncogene family.
    
 0.657
RAB25
RAB25, member RAS oncogene family.
    
 0.579
ENSSMRP00000026593
annotation not available
    
 0.520
CBFA2T3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
   
    0.472
RUNX1T1
RUNX1 partner transcriptional co-repressor 1.
   
    0.472
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
   
    0.436
HCCS
Holocytochrome c synthase.
   
 
 0.408
TMEM192
Transmembrane protein 192.
   
  0.405
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.