STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD3Homeobox D3. (438 aa)    
Predicted Functional Partners:
HOXA5
Homeobox A5.
   
  
0.829
HOXA4
Homeobox A4.
   
  
0.807
HOXA7
Homeobox A7.
   
  
0.736
ENSSMRP00000003571
annotation not available
   
 
0.543
HOXA10
Homeobox A10.
   
 
0.496
PBX4
PBX homeobox 4.
    
 0.472
ENSSMRP00000010083
annotation not available
    
 0.472
PBX2
PBX homeobox 2.
    
 0.472
ENSSMRP00000030705
annotation not available
    
 0.472
ENSSMRP00000030706
annotation not available
    
 0.472
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.