STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF8PHD finger protein 8. (1005 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.887
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.809
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.793
EED
Embryonic ectoderm development.
    
 0.779
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.774
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.774
RING1
Ring finger protein 1.
    
 0.770
RNF2
Ring finger protein 2.
    
 0.770
SUV39H1
Suppressor of variegation 3-9 homolog 1.
    
 0.734
WDR82
WD repeat domain 82.
     
 0.732
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.