STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D20TBC1 domain family member 20. (396 aa)    
Predicted Functional Partners:
RAB1A
RAB1A, member RAS oncogene family.
    
 0.876
ENSSMRP00000014410
annotation not available
    
 0.876
ENSSMRP00000019716
annotation not available
    
 0.876
RAB33A
RAB33A, member RAS oncogene family.
    
 0.728
RAB33B
RAB33B, member RAS oncogene family.
    
 0.728
RAB19
RAB19, member RAS oncogene family.
    
 0.710
RAB43
RAB43, member RAS oncogene family.
    
 0.710
RABL6
RAB, member RAS oncogene family like 6.
    
 0.698
CGNL1
Cingulin like 1.
    
 0.698
ENSSMRP00000002712
annotation not available
    
 0.698
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.