STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH1Protocadherin 1. (1260 aa)    
Predicted Functional Partners:
MARC2
Mitochondrial amidoxime reducing component 2.
    
  0.641
JUP
Junction plakoglobin.
    
 0.632
LHFPL2
LHFPL tetraspan subfamily member 2.
    
  0.617
ENSSMRP00000009179
annotation not available
    
 0.610
CIT
Citron rho-interacting serine/threonine kinase.
    
  0.592
APLP2
Amyloid beta precursor like protein 2.
    
  0.574
ENSSMRP00000020648
annotation not available
    
 0.573
MYO9A
Myosin IXA.
    
 0.563
ANLN
Anillin actin binding protein.
    
  0.560
PECAM1
Platelet and endothelial cell adhesion molecule 1.
    
  0.549
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.