STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF149Ring finger protein 149. (411 aa)    
Predicted Functional Partners:
ENSSMRP00000018987
annotation not available
    
 0.711
UBE2K
Ubiquitin conjugating enzyme E2 K.
    
 0.636
ENSSMRP00000004493
annotation not available
    
 0.612
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.612
ENSSMRP00000017472
annotation not available
    
 0.612
ENSSMRP00000029619
annotation not available
   
 0.609
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.605
RXFP1
Relaxin family peptide receptor 1.
    
 0.605
ENSSMRP00000007713
annotation not available
    
 0.605
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.605
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.