STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS7ADAM metallopeptidase with thrombospondin type 1 motif 7. (1760 aa)    
Predicted Functional Partners:
B3GLCT
Beta 3-glucosyltransferase.
    
 0.597
USF2
Upstream transcription factor 2, c-fos interacting.
    
  0.509
POFUT2
Protein O-fucosyltransferase 2.
     
 0.497
ENSSMRP00000023184
annotation not available
     
 0.480
USF1
Upstream transcription factor 1.
   
  0.443
ENSSMRP00000001238
annotation not available
    
 0.436
THBS4
Thrombospondin 4.
    
 0.436
INO80D
INO80 complex subunit D.
      
 0.433
TMEM216
Transmembrane protein 216.
      
 0.414
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.