STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAG1Stromal antigen 1. (1257 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes 3.
   
 0.992
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.988
SMC1A
Structural maintenance of chromosomes 1A.
   
 0.988
RAD21
RAD21 cohesin complex component.
   
 0.986
NIPBL
NIPBL cohesin loading factor.
   
 0.974
ENSSMRP00000004768
annotation not available
   
 0.962
ENSSMRP00000025203
annotation not available
   
 0.962
ESPL1
Extra spindle pole bodies like 1, separase.
    
 0.940
PDS5A
PDS5 cohesin associated factor A.
   
 0.934
PDS5B
PDS5 cohesin associated factor B.
   
 0.933
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.