STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R27Protein phosphatase 1 regulatory subunit 27. (150 aa)    
Predicted Functional Partners:
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
  
 0.817
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
  
 0.817
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
  
 0.817
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.765
WDR82
WD repeat domain 82.
    
  0.732
PPP1R14A
Protein phosphatase 1 regulatory inhibitor subunit 14A.
     
 0.650
MARS1
methionyl-tRNA synthetase 1.
   
 0.598
MYL1
Myosin light chain 1.
   
 0.595
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.591
UBXN7
UBX domain protein 7.
    
 0.560
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.