STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSX1Msh homeobox 1. (296 aa)    
Predicted Functional Partners:
MSX2
Msh homeobox 2.
  
0.910
TTR
Transthyretin.
   
 
 0.693
ENSSMRP00000008966
annotation not available
     
 0.684
PAX9
Paired box 9.
    
 
 0.668
ENSSMRP00000024841
annotation not available
    
 
 0.585
RUNX2
RUNX family transcription factor 2.
    
 0.566
UBTF
Upstream binding transcription factor.
    
 
 0.559
CRMP1
Collapsin response mediator protein 1.
     
 0.539
CSRNP1
Cysteine and serine rich nuclear protein 1.
      
 0.529
LEF1
Lymphoid enhancer binding factor 1.
   
  
 0.521
Your Current Organism:
Salvator merianae
NCBI taxonomy Id: 96440
Other names: Argentine black and white tegu, S. merianae, Tupinambis merianae, ZFMK 89199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.