STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC148Coiled-coil domain containing 148. (428 aa)    
Predicted Functional Partners:
G1M6W1_AILME
Uncharacterized protein.
 
     0.866
LRRC49
Leucine rich repeat containing 49.
   
  
 0.541
IMMP2L
Uncharacterized protein.
      
 0.453
MORN3
MORN repeat containing 3.
   
  
 0.449
SORD
Sorbitol dehydrogenase.
      
 0.440
C11orf65
Chromosome 11 open reading frame 65.
      
 0.440
SDK1
Sidekick cell adhesion molecule 1.
      
 0.436
NAA16
N(alpha)-acetyltransferase 16, NatA auxiliary subunit.
      
 0.435
CDH26
Cadherin 26.
      
 0.435
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.