STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZD3PDZ domain containing 3. (504 aa)    
Predicted Functional Partners:
FIGNL1
Fidgetin like 1; Belongs to the AAA ATPase family.
     
 0.734
SPRYD7
SPRY domain containing 7.
    
 
 0.693
PDZD4
PDZ domain containing 4.
      
 0.676
GUCA2B
Guanylate cyclase activator 2B.
   
  
 0.638
HSDL1
Hydroxysteroid dehydrogenase like 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.624
ABITRAM
Actin binding transcription modulator.
      
 0.606
NIPAL3
NIPA like domain containing 3.
      
 0.603
NIPAL1
NIPA like domain containing 1.
      
 0.583
SERAC1
Serine active site containing 1.
      
 0.544
SLC35A4
Solute carrier family 35 member A4.
      
 0.544
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.